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[M(TPA)Cl]ClO4·nH2O complexes (1: M = Co II, n = 0; 2: M = CuII, n = ; 3: M = ZnII, n = 0) where TPA = tris(2-pyridylmethyl)amine, were synthesized and structurally characterized. The molecular structure of [Cu(TPA)Cl]ClO4· H2O was determined by single crystal X-ray crystallography. In aqueous solution, the complex ions [M(TPA)Cl]+ (M = CoII or CuII) are hydrolyzed to the corresponding aqua species [M(TPA)(H2O)]2+. In contrast to the TBP [Cu(TPA)(H 2O)]2+, the corresponding TBP cobalt(II) species showed severe distortion towards tetrahedral geometry. The interactions of the three complexes with DNA have been investigated at pH 7.0 (1.0 mM Tris-Cl buffer) and 37 C. Significant DNA cleavages were obtained for complexes 1 and 2, whereas complex 3 did not show any detectable cleavage for DNA. Under pseudo Michaelis-Menten kinetic conditions, the kinetic parameters kcat and KM were determined as kcat = 6.59 h-1 and KM = 2.20 × 10-4 M for 1 and the corresponding parameters for 2 are kcat = 5.7 × 10-2 h -1 and KM = 6.9 × 10-5 M, and the reactivity of the complexes in promoting the cleavage of DNA decreases in the order 1 > 2 ? 3. The rate enhancements for the DNA cleavage by 1 and 2 correspond to 1.8 × 108 and 1.6 × 106, respectively, over the non-catalyzed DNA. The reactivity of the two complexes was discussed in relation to other related artificial nucleases.

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Reference:
Metal catalyst and ligand design,
Ligand Template Strategies for Catalyst Encapsulation – NCBI

Archives for Chemistry Experiments of Tris(2-pyridylmethyl)amine

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The growing interest in green chemistry has fueled attention to the development and characterization of effective iron complex oxidation catalysts. A number of iron complexes are known to catalyze the oxidation of organic substrates utilizing peroxides as the oxidant. Their development is complicated by a lack of direct comparison of the reactivities of the iron complexes. To begin to correlate reactivity with structural elements, we compare the reactivities of a series of iron pyridyl complexes toward a single dye substrate, malachite green (MG), for which colorless oxidation products are established. Complexes with tetradentate, nitrogen-based ligands with cis open coordination sites were found to be the most reactive. While some complexes reflect sensitivity to different peroxides, others are similarly reactive with either H2O2 or tBuOOH, which suggests some mechanistic distinctions. [Fe(S,S-PDP)(CH3CN)2](SbF6)2 and [Fe(OTf)2(tpa)] transition under the oxidative reaction conditions to a single intermediate at a rate that exceeds dye degradation (PDP = bis(pyridin-2-ylmethyl) bipyrrolidine; tpa = tris(2-pyridylmethyl)amine). For the less reactive [Fe(OTf)2(dpa)] (dpa = dipicolylamine), this reaction occurs on a timescale similar to that of MG oxidation. Thus, the spectroscopic method presented herein provides information about the efficiency and mechanism of iron catalyzed oxidation reactions as well as about potential oxidative catalyst decomposition and chemical changes of the catalyst before or during the oxidation reaction.

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Reference:
Metal catalyst and ligand design,
Ligand Template Strategies for Catalyst Encapsulation – NCBI

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Protein-polymer hybrids are an important class of biomaterials. Described is the preparation of a genetically incorporated a non-canonical amino acid (nCAA) containing an ester linked atom transfer radical polymerization (ATRP) initiator, followed by a controlled “grafting from” polymerization. A Methanococcus jannaschii tyrosyl-tRNA synthetase/tRNACUA pair was selected to genetically encode p-bromoisobutyryloxymethyl-l-phenylalanine (biF) in response to an amber codon. This biF was directly incorporated into green fluorescent protein (GFP) at residue 134 generating biF-GFP. Activators regenerated by electron transfer (ARGET) ATRP was conducted under biologically relevant conditions to graft well-defined poly(oligo ethylene oxide methacrylate) from the biF-GFP. The biF-GFP retained its biofluorescence properties throughout the polymerization indicating the utility of ARGET ATRP for preparing protein-polymer hybrids. The presence of a base-labile ester bond in the initiator, allowed cleavage of the grafted polymer from the protein and directly analyze their molecular weight and molecular weight distribution using gel permeation chromatography (GPC). The cleaved final polymer had a M n = 27,000 and a molecular weight distribution of M w/Mn = 1.27.

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Reference:
Metal catalyst and ligand design,
Ligand Template Strategies for Catalyst Encapsulation – NCBI

Archives for Chemistry Experiments of Tris(2-pyridylmethyl)amine

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A catalyst don’t appear in the overall stoichiometry of the reaction it catalyzes, Safety of Tris(2-pyridylmethyl)amine, but it must appear in at least one of the elementary reactions in the mechanism for the catalyzed reaction. 16858-01-8, Name is Tris(2-pyridylmethyl)amine, molecular formula is C18H18N4. In a Article, authors is Dzik, Wojciech I.,once mentioned of 16858-01-8

Cationic rhodium carbonyl complexes supported by a series of different N3- and N4-donor ligands were prepared, and their ability to form carbonyl-bridged species was evaluated. Complex [Rh(- 3-bpa)(cod)]+ (1+) (bpa = bis(2-picolyl)amine, cod = cis,cis-1,5-cyclooctadiene) reacts with 1 bar of CO to form a tris-carbonyl-bridged species [Rh2(-3-bpa) 2(mu-CO)3]2+ (22+), which in solution slowly decomposes to the terminal monocarbonyl complex [Rh(- 3-bpa)(CO)]+ (3+). Similar conditions lead to direct formation of a terminal monocarbonyl species, [Rh(-3-Bu-bpa) (CO)]+ (5+), from [Rh(-3-Bu-bpa)(cod)] + (4+) (Bu-bpa = N-butylbis(2-picolyl)amine). Treatment of 4+ with 50 bar of CO leads to only partial conversion (-15%) to the tris-carbonyl-bridged species [Rh2(-3-Bu-bpa) 2(mu-CO)3]2+ (62+). Stabilization of tris-carbonyl bridges can be achieved by cooperative binding. Tethering two bpa moieties with a propylene linker allows cooperative CO binding to [(CO)Rh(mu-(bis–3)tppn)Rh(CO)]2+, producing the tetranuclear complex [Rh4(mu-(bis–3)tppn) 2((mu-CO)3)2]4+ (13)4+ at 50 bar of CO (tppn = tppn = N1,N1,N2,N 2-tetrakis(pyridin-2-ylmethyl)propane-1,2-diamine). Tetranuclear complex 134+ is stable at room temperature in the absence of CO (in contrast to binuclear Rh(mu2-CO)3Rh-bridged complex 62+). In solution, the cationic rhodium carbonyl complex [Rh(- 3-tpa)(CO)]+ (14+) (containing the N 4-donor ligand tpa = tris(2-picolyl)amine)) exists in dynamic equilibrium with the dinuclear bis-carbonyl-bridged species [Rh(- 4-tpa)(mu-CO)]22+ (152+). Remarkably, the bis-carbonyl-bridged Rh(mu2-CO)2Rh motive in 152+ is not supported by a Rh-Rh bond or other bridging ligands. The thermodynamic parameters for dimerization of 14+ to 152+ in acetone were measured (deltaH = -28.4 ± 1.7 kJ-mol-1 and deltaS = -134 ± 7 J-mol-K-1). Formation of bis-carbonyl-bridged species was not observed with the weaker Me3tpa ligand. The stability of the bis- and tris-carbonyl-bridged structures clearly depends on a delicate balance between the favorable enthalpy (enhanced with stronger –donor ligands) and unfavorable entropy (that can be reduced by multivalent binding) associated with their formation. In the solid state complex 14+ reacts selectively with dioxygen to form a carbonato complex, [Rh(-4-tpa)(CO3)]+ (16 +).

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Reference:
Metal catalyst and ligand design,
Ligand Template Strategies for Catalyst Encapsulation – NCBI

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Catalysts function by providing an alternate reaction mechanism that has a lower activation energy than would be found in the absence of the catalyst. In some cases, the catalyzed mechanism may include additional steps.In a article, 16858-01-8, molcular formula is C18H18N4, introducing its new discovery. Application In Synthesis of Tris(2-pyridylmethyl)amine

Three new morpholine-based ligands were synthesized to better control ATRP in aqueous media. 4-(bis(N,N-diethylaminoethyl)aminoethyl)morpholine (MMA), N,N-diethylaminoethyl-bis(2-morpholinoethyl)amine, and tris(2-morpholinoethyl)amine ligands were created and investigated to better understand the effect of electron withdrawing groups on the degree of control obtained under aqueous ATRP conditions. Polymerization performance of these ligands with the neutral oligo(ethylene glycol) methyl ether methacrylate and zwitterionic carboxybetaine methacrylate monomers was compared with tris(2-(diethylamino)ethyl)amine (Et6TREN) ligand. The new ligands showed decreased polymerization rates and yielded polymers with lower dispersities than those synthesized with Et6TREN. These results indicated that altering the basicity of the central tertiary amine is an important factor in controlling the stability of the copper(I) complex, leading to better control over aqueous ATRP. Finally, uniform protein?polymer conjugates were synthesized with the MMA ligand using protein-ATRP.

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Reference:
Metal catalyst and ligand design,
Ligand Template Strategies for Catalyst Encapsulation – NCBI

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Iron-Based Molecular Water Oxidation Catalysts: Abundant, Cheap, and Promising

An efficient and robust water oxidation catalyst based on abundant and cheap materials is the key to converting solar energy into fuels through artificial photosynthesis for the future of humans. The development of molecular water oxidation catalysts (MWOCs) is a smart way to achieve promising catalytic activity, thanks to the clear structures and catalytic mechanisms of molecular catalysts. Efficient MWOCs based on noble-metal complexes, for example, ruthenium and iridium, have been well developed over the last 30 years; however, the development of earth-abundant metal-based MWOCs is very limited and still challenging. Herein, the promising prospect of iron-based MWOCs is highlighted, with a comprehensive summary of previously reported studies and future research focus in this area.

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Metal catalyst and ligand design,
Ligand Template Strategies for Catalyst Encapsulation – NCBI

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Structure and magnetism of heptanuclear complex constructed by the encapsulation of octacyanotungstate(IV) with copper(II) cations of tripodal ligands

A new heptanuclear compound [{Cu(TPA)CN}6W(CN) 2][ClO4]8·14H2O (1) (TPA = tris(2-pyridylmethyl)amine) was synthesized by the reaction of [Cu(TPA)] 2 + unit and K4W(CN)8. The cyanometalate core is encapsulated by mononuclear copper moieties via cyano bridges. 1 crystallizes in monoclinic space group P21/c with a = 22.01(2) A?, b = 26.87(3) A?, c = 31.64(2) A?, beta = 128.87(2), and Z = 4. Variable temperature magnetic measurements have demonstrated that very weak ferromagnetic interaction between the nearest paramagnetic CuII centers is exhibited. Thus weak ferromagnetic coupling might be transferred by NCWCN bridging units.

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Metal catalyst and ligand design,
Ligand Template Strategies for Catalyst Encapsulation – NCBI

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Mononuclear Cobalt and Iron o-Quinone Complexes with Tetradentate N-Donor Bases: Structures and Properties

Abstract: Published data on the electronic structures and magnetic behavior of the mononuclear cobalt and iron o-benzoquinone complexes with tetradentate nitrogen-containing bases are reviewed. The chosen objects are of significant interest due to their ability to manifest magnetic bistability, indicating wide prospects of the practical use of compounds of this class in molecular electronics and spintronics. The influence of structural features of the complexes on their magnetic properties is discussed on the basis of the quantum-chemical calculation results.

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Reference:
Metal catalyst and ligand design,
Ligand Template Strategies for Catalyst Encapsulation – NCBI

Discovery of Tris(2-pyridylmethyl)amine

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SP-PLP-EPR Measurement of CuII-Mediated ATRP Deactivation and CuI-Mediated Organometallic Reactions in Butyl Acrylate Polymerization

The SP-PLP-EPR technique has been used to measure CuII-mediated ATRP deactivation and CuI-mediated organometallic reactions for butyl acrylate (BA) polymerization. The deactivation rate is by more than 1 order of magnitude higher than in dodecyl methacrylate (DMA) polymerization, thus enabling well-controlled ATRP despite the enhanced BA propagation rate. The organometallic reaction of CuI with BA radicals was found to play a role only with highly active Cu catalysts, as demonstrated for the Cu/TPMA-mediated ATRP of BA.

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Reference:
Metal catalyst and ligand design,
Ligand Template Strategies for Catalyst Encapsulation – NCBI

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Copper containing molecular systems in electrocatalytic water oxidation?Trends and perspectives

Molecular design represents an exciting platform to refine mechanistic details of electrocatalytic water oxidation and explore new perspectives. In the growing number of publications some general trends seem to be outlined concerning the operation mechanisms, with the help of experimental and theoretical approaches that have been broadly applied in the case of bioinorganic systems. In this review we focus on bio-inspired Cu-containing complexes that are classified according to the proposed mechanistic pathways and the related experimental evidence, strongly linked to the applied ligand architecture. In addition, we devote special attention to features of molecular compounds, which have been exploited in the efficient fabrication of catalytically active thin films.

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Reference:
Metal catalyst and ligand design,
Ligand Template Strategies for Catalyst Encapsulation – NCBI